Stem-loop sequence mtr-MIR156i

Accession

MI0005626 (change log)

Description

Medicago truncatula miR156i stem-loop

Gene family

MIPF0000008; MIR156

Literature search

10 open access papers mention mtr-MIR156i
(77 sentences)

Stem-loop

   -gauau        -    -        au    c  u         a 
5'       ugacagaa gaga gugagcac  gcug ag gauuguaug u
         |||||||| |||| ||||||||  |||| || |||||||||  
3'       acugucuu cucu cacucgug  uggu uc uuaacauac a
   uauucu        u    u        cg    -  -         g 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_Mt3.5.2): chr4: 46126859-46126951 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0005626

Mature sequence mtr-miR156i-5p

• Accession: MIMAT0011112
• Sequence: 6 - ugacagaagagagugagcac - 25
• Evidence: experimental; Illumina [2]

Mature sequence mtr-miR156i-3p

• Accession: MIMAT0026733
• Sequence: 67 - ugcucacuucucuuucugucauc - 89
• Evidence: experimental; Illumina [2]

References

1. " Bonnet E Unpublished (2007).
2. PMID:23572382 "microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula" Eyles RP, Williams PH, Ohms SJ, Weiller GF, Ogilvie HA, Djordjevic MA, Imin N Planta. 238:91-105(2013).