Stem-loop sequence ame-mir-283

Accession MI0005735
Description Apis mellifera miR-283 stem-loop
Gene family MIPF0000054; mir-216
Stem-loop 
---aauaa  ug  ga       aa        u  u         a  uug 
        uc  gu  uguaguc  auaucagc gg aauucuggg uu   a
        ||  ||  |||||||  |||||||| || ||||||||| ||    
        ag  ca  gcaucgg  uauggucg uc uuaggaccc aa   c
ccgcuagc  gu  -a       cc        u  -         -  uaa
Get sequence
Deep sequencing
54 reads, 1 experiments
Genome context
Coordinates (Amel_4.0) Overlapping transcripts
Group2.17: 23695-23794 [-]
intergenic
Clustered miRNAs
< 10kb from ame-mir-283
ame-mir-283 Group2.17: 23695-23794 [-]
ame-mir-3477 Group2.17: 22925-23023 [-]
ame-mir-12 Group2.17: 22430-22512 [-]
Database links
  • ENTREZGENE: 100315665;Mir283

Mature sequence ame-miR-283

Accession MIMAT0004426
Sequence

21 -  

aaauaucagcugguaauucu

 - 40

Get sequence
Deep sequencing 54 reads, 1 experiments
Evidence experimental; RTPCR [1]

References

1
PMID:17543122 "Computational and transcriptional evidence for microRNAs in the honey bee genome" Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG Genome Biol. 8:R97(2007).