miRBase entry: ame-mir-92a

Stem-loop ame-mir-92a


Accession
MI0005745
Description
Apis mellifera ame-mir-92a precursor miRNA
Gene family
MIPF0000013; mir-25

Literature search
3 open access papers mention ame-mir-92a
(7 sentences)

Sequence

uuauuuugcauagaagauaggccgagauuugugacaauguuucgugaugauguaaucuucaauAUUGCACUUGUCCCGGCCUAUcggaaugcauuauauu
.(((..(((((....(((((((((.(((..(((.(((((((....(((......)))...))))))))))..))).)))))))))...)))))..)))..

Structure
-u   uu     agaa         a   uu   a       ucgu   ga 
  uau  ugcau    gauaggccg gau  gug caauguu    gau  u
  |||  |||||    ||||||||| |||  ||| |||||||    |||   
  aua  acgua    cUAUCCGGC CUG  CAC GUUAuaa    cua  g
uu   uu     -agg         C   UU   -       -cuu   au 


Annotation confidence Not enough data
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Genome context
CM000066.5: 8056052-8056151 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ame-mir-92a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ame-miR-92a-3p

Accession MIMAT0004435
Description Apis mellifera ame-miR-92a-3p mature miRNA
Sequence 64 - AUUGCACUUGUCCCGGCCUAU - 84
Evidence experimental
RTPCR [2], Illumina [3]

References

  1. PubMed ID: 17543122
    Computational and transcriptional evidence for microRNAs in the honey bee genome
    Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG
    Genome Biol (2007) 8:R97

  2. PubMed ID: 22409512
    Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
    "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
    "Genes Brain Behav (2012) 11:660-670

  3. PubMed ID: 20491979
    Correlated expression patterns of microRNA genes with age-dependent behavioural changes in honeybee
    "Behura SK, Whitfield CW"
    "Insect Mol Biol (2010) 19:431-439