Stem-loop pta-MIR482a

Accession

MI0005791

Description

Pinus taeda pta-MIR482a precursor miRNA

Gene family

MIPF0000403; MIR482

Sequence

gagguguggaaggauaggguaagacuaagguuaaggagaaacucugcuucauuaauucucugcuccagUCUUCCCUACUCCUCCCAUUCCuu
((((.((((.(((((((((.((((((..((....((((((...............))))))...))))))))))))).)))).)))).))))

Structure

    u    a    -     u      aa  uuaa      acucug 
gagg gugg agga uaggg aagacu  gg    ggagaa      c
|||| |||| |||| ||||| ||||||  ||    ||||||      u
uuCC UACC UCCU AUCCC UUCUga  cc    ucucuu      u
    U    C    C     -      --  -ucg      aauuac 

Annotation confidence Not enough data

Genome context

Unknown

Mature pta-miR482a

• Accession: MIMAT0005002
• Description: Pinus taeda pta-miR482a mature miRNA
• Sequence: 69 - UCUUCCCUACUCCUCCCAUUCC - 90
• Evidence: not_experimental

References

1. PubMed ID: 17635765
   MicroRNAs in loblolly pine (Pinus taeda L.) and their association with fusiform rust gall development
   "Lu S, Sun YH, Amerson H, Chiang VL"
   "Plant J (2007) 51:1077-1098