Stem-loop pta-MIR482b

Accession

MI0005792

Description

Pinus taeda pta-MIR482b precursor miRNA

Gene family

MIPF0000403; MIR482

Sequence

gagguguggaaggauaggguaagacuaggguuaagcagaaacucugcuucauuaauucucugcuccagUCUUCCCUACUCCUCCCAUUCCuu
((((.((((.(((((((((.((((((.((((.(((((((...)))))))............)))).))))))))))).)))).)))).))))

Structure

    u    a    -     u      a    -----------u       a 
gagg gugg agga uaggg aagacu gggu            aagcaga  
|||| |||| |||| ||||| |||||| ||||            ||||||| a
uuCC UACC UCCU AUCCC UUCUga cucg            uucgucu  
    U    C    C     -      c    ucucuuaauuac       c 

Annotation confidence Not enough data

Genome context

Unknown

Mature pta-miR482b

• Accession: MIMAT0005003
• Description: Pinus taeda pta-miR482b mature miRNA
• Sequence: 69 - UCUUCCCUACUCCUCCCAUUCC - 90
• Evidence: not_experimental

References

1. PubMed ID: 17635765
   MicroRNAs in loblolly pine (Pinus taeda L.) and their association with fusiform rust gall development
   "Lu S, Sun YH, Amerson H, Chiang VL"
   "Plant J (2007) 51:1077-1098