Stem-loop sequence dme-mir-954

Accession MI0005806
Description Drosophila melanogaster miR-954 stem-loop
Stem-loop 
ua   aca      uuucu           -  u   ua    u 
  caa   caagau     ggguguugcgu ug gug  ccug g
  |||   ||||||     ||||||||||| || |||  ||||  
  guu   guucua     ccuacaacgua ac uau  ggac u
ua   --c      cauuc           c  u   gc    a
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Deep sequencing
2506 reads, 47 experiments
Genome context
Coordinates (BDGP5.0) Overlapping transcripts
4: 646752-646838 [+]
intergenic

Mature sequence dme-miR-954-5p

Accession MIMAT0005465
Previous IDs dme-miR-954
Sequence

17 -  

ucuggguguugcguugugugu

 - 37

Get sequence
Deep sequencing 1892 reads, 46 experiments
Evidence experimental; 454 [1]
Predicted targets

Mature sequence dme-miR-954-3p

Accession MIMAT0020846
Sequence

55 -  

uucacaugcaacaucccuuac

 - 75

Get sequence
Deep sequencing 613 reads, 44 experiments
Evidence not experimental
Predicted targets

References

1
PMID:17989254 "Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs" Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC Genome Res. 17:1850-1864(2007).