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miRBase |
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Stem-loop sequence dme-mir-193 |
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Accession | MI0005809 (change log) | ||||
Description | Drosophila melanogaster miR-193 stem-loop | ||||
Gene family | MIPF0000082; mir-193 | ||||
Literature search |
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7 open access papers mention dme-mir-193 | ||||
Stem-loop |
ugug c g uu au c -----------u u a 5' ugc cuuauuaug uugggauuu uag cag ag uau gcu u ||| ||||||||| ||||||||| ||| ||| || ||| ||| 3' aug gaguaauac aacccugaa auc guc uc aua cga a --aa a - uc cg a uucuaaauauuu c u |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence dme-miR-193-5p |
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Accession | MIMAT0020849 |
Sequence |
19 - uugggauuuuuuagaucagcag - 40 |
Deep sequencing | 14717 reads, 41 experiments |
Evidence | not experimental |
Database links |
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Mature sequence dme-miR-193-3p |
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Accession | MIMAT0005468 |
Previous IDs | dme-miR-193 |
Sequence |
73 - uacuggccuacuaagucccaac - 94 |
Deep sequencing | 11176 reads, 45 experiments |
Evidence | experimental; 454 [1-2], Illumina [2] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:17989254
"Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs"
Genome Res. 17:1850-1864(2007).
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2 |
PMID:17989255
"Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes"
Genome Res. 17:1865-1879(2007).
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