miRBase entry: dme-mir-932

Stem-loop dme-mir-932


Accession
MI0005820
Description
Drosophila melanogaster dme-mir-932 precursor miRNA
Gene family
MIPF0000588; mir-932

Literature search
4 open access papers mention dme-mir-932
(10 sentences)

Sequence

19789 reads, 569 reads per million, 48 experiments
uugguuuugaaguuuUCAAUUCCGUAGUGCAUUGCAGuguguuucauuauuuacUGCAAGCGCUGCGGAUUUGGCAacuuugacgaccuuc
..((((((((((((.((((.((((((((((.((((((((.((......)).)))))))))))))))))).)))).)))))))).))))...

Structure
-uu    -        u    U          A        u  uu 
   gguu uugaaguu UCAA UCCGUAGUGC UUGCAGug gu  c
   |||| |||||||| |||| |||||||||| |||||||| ||   
   ccag aguuucaA GGUU AGGCGUCGCG AACGUcau ua  a
cuu    c        C    U          -        u  uu 


Annotation confidence High
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Genome context
chr2L: 6902062-6902152 [+]

Database links

Mature dme-miR-932-5p

Accession MIMAT0005479
Description Drosophila melanogaster dme-miR-932-5p mature miRNA
Sequence 16 - UCAAUUCCGUAGUGCAUUGCAG - 37
Evidence experimental
454 [1-2], Illumina [2]
Database links
Predicted targets

Mature dme-miR-932-3p

Accession MIMAT0020860
Description Drosophila melanogaster dme-miR-932-3p mature miRNA
Sequence 55 - UGCAAGCGCUGCGGAUUUGGCA - 76
Evidence not_experimental
Database links

References

  1. PubMed ID: 17989254
    Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
    "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
    "Genome Res (2007) 17:1850-1864

  2. PubMed ID: 17989255
    Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes
    "Stark A, Kheradpour P, Parts L, Brennecke J, Hodges E, Hannon GJ, Kellis M"
    "Genome Res (2007) 17:1865-1879