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miRBase |
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Stem-loop sequence dme-mir-965 |
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Accession | MI0005821 (change log) | ||||
Description | Drosophila melanogaster miR-965 stem-loop | ||||
Gene family | MIPF0000708; mir-965 | ||||
Literature search |
3 open access papers mention dme-mir-965 | ||||
Stem-loop |
-- a uu - a u - a ugcccuu 5' g caaua gcuc aac uuuugggggg aaaa cuguacguu uaug c | ||||| |||| ||| |||||||||| |||| ||||||||| |||| u 3' c guuau cgag uug aaaauucccc uuuu gauaugcga auac g aa - -- a - - c - uuauagu |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence dme-miR-965-5p |
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Accession | MIMAT0020861 |
Sequence |
24 - gggguaaaacuguacguuauaug - 46 |
Deep sequencing | 5479 reads, 49 experiments |
Evidence | not experimental |
Database links |
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Mature sequence dme-miR-965-3p |
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Accession | MIMAT0005480 |
Previous IDs | dme-miR-965 |
Sequence |
66 - uaagcguauagcuuuuccccuu - 87 |
Deep sequencing | 29240 reads, 43 experiments |
Evidence | experimental; 454 [1-2], Illumina [2] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:17989254
"Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs"
Genome Res. 17:1850-1864(2007).
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2 |
PMID:17989255
"Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes"
Genome Res. 17:1865-1879(2007).
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