Stem-loop sequence dme-mir-974

Accession MI0005831
Description Drosophila melanogaster miR-974 stem-loop
Stem-loop 
caauugucacc  u  u    u ca   gag   a     a        guuu 
           gg ca gucc c  agc   caa gaagu guauuugu    c
           || || |||| |  |||   ||| ||||| ||||||||     
           cc gu uagg g  ucg   guu cuuca uauaaacg    c
-------uaaa  c  u    u aa   aag   a     a        agaa
Get sequence
Deep sequencing
235 reads, 24 experiments
Genome context
Coordinates (BDGP5.0) Overlapping transcripts
X: 19445711-19445811 [+]
intergenic
Clustered miRNAs
< 10kb from dme-mir-974
dme-mir-972 X: 19445185-19445275 [+]
dme-mir-973 X: 19445561-19445661 [+]
dme-mir-974 X: 19445711-19445811 [+]
dme-mir-2499 X: 19451041-19451136 [+]
dme-mir-4966 X: 19452403-19452529 [+]
dme-mir-975 X: 19452786-19452876 [+]
dme-mir-976 X: 19452928-19453024 [+]
dme-mir-977 X: 19453055-19453153 [+]
dme-mir-978 X: 19455269-19455360 [+]

Mature sequence dme-miR-974-5p

Accession MIMAT0005490
Previous IDs dme-miR-974
Sequence

25 -  

aagcgagcaaagaaguaguauu

 - 46

Get sequence
Deep sequencing 124 reads, 22 experiments
Evidence experimental; 454 [1]
Predicted targets

Mature sequence dme-miR-974-3p

Accession MIMAT0020871
Sequence

65 -  

uauaacuucauuggaagcuaag

 - 86

Get sequence
Deep sequencing 89 reads, 9 experiments
Evidence not experimental
Predicted targets

References

1
PMID:17989254 "Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs" Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC Genome Res. 17:1850-1864(2007).