miRBase entry: dme-mir-976

Stem-loop dme-mir-976


Accession
MI0005833
Description
Drosophila melanogaster dme-mir-976 precursor miRNA
Gene family
MIPF0000916; mir-976


Sequence

513 reads, 128 reads per million, 37 experiments
caucgccaugcagugccgcggcAUUGGUGAGGCCAUCUCCAAUGgauuaguucucaacaUUGGAUUAGUUAUCAUCAAUGCcggugcacugcaccua
........((((((((..((((((((((((.......(((((((.............))))))).......))))))))))))..))))))))....

Structure
caucgcca        cg            GGCCAUC       gauua 
        ugcagugc  cggcAUUGGUGA       UCCAAUG     g
        ||||||||  ||||||||||||       |||||||     u
        acgucacg  gcCGUAACUACU       AGGUUac     u
----aucc        ug            AUUGAUU       aacuc 


Annotation confidence Not enough data
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Genome context
chrX: 19558895-19558991 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from dme-mir-976
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dme-miR-976-3p

Accession MIMAT0005492
Description Drosophila melanogaster dme-miR-976-3p mature miRNA
Sequence 60 - UUGGAUUAGUUAUCAUCAAUGC - 81
Evidence experimental
454 [1]
Database links
Predicted targets

Mature dme-miR-976-5p

Accession MIMAT0020873
Description Drosophila melanogaster dme-miR-976-5p mature miRNA
Sequence 23 - AUUGGUGAGGCCAUCUCCAAUG - 44
Evidence not_experimental
Database links

References

  1. PubMed ID: 17989254
    Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
    "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
    "Genome Res (2007) 17:1850-1864