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miRBase |
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Stem-loop sequence dme-mir-978 |
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Accession | MI0005835 (change log) | |||||||||||||||||||||
Description | Drosophila melanogaster miR-978 stem-loop | |||||||||||||||||||||
Gene family | MIPF0000926; mir-978 | |||||||||||||||||||||
Literature search |
1 open access papers mention dme-mir-978 | |||||||||||||||||||||
Stem-loop |
guug --- u c c cu uugcaa 5' gcg gcacaa cugcaau uacg cacugg uacg u ||| |||||| ||||||| |||| |||||| |||| 3' cgc uguguu gacguua augc gugacc gugc c -aaa aag - a c -u uaaaag |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence dme-miR-978-5p |
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Accession | MIMAT0020875 |
Sequence |
16 - ugcaaucuacgccacuggcuuacg - 39 |
Deep sequencing | 201 reads, 12 experiments |
Evidence | not experimental |
Database links |
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Mature sequence dme-miR-978-3p |
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Accession | MIMAT0005494 |
Previous IDs | dme-miR-978 |
Sequence |
56 - uguccagugccguaaauugcag - 77 |
Deep sequencing | 911 reads, 27 experiments |
Evidence | experimental; 454 [1] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:17989254
"Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs"
Genome Res. 17:1850-1864(2007).
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