miRBase entry: dme-mir-983-2

Stem-loop dme-mir-983-2


Accession
MI0005841
Description
Drosophila melanogaster dme-mir-983-2 precursor miRNA
Gene family
MIPF0000450; mir-983

Literature search
4 open access papers mention dme-mir-983-2
(15 sentences)

Sequence

1676 reads, 327 reads per million, 48 experiments
uauuauauugcaauaauuaaAUAAUACGUUUCGAACUAAUGAuuuucaguucauucAUUAGGUAGUUACGCAUUAUCUaguuguuguaaacauucaacu
.......((((((((((((.(((((.(((..(...(((((((............)))))))...)..))).))))).))))))))))))..........

Structure
---uauuaua            a     A   UU GAA       uuuuc 
          uugcaauaauua AUAAU CGU  C   CUAAUGA     a
          |||||||||||| ||||| |||  |   |||||||      
          aauguuguugaU UAUUA GCA  G   GAUUAcu     g
ucaacuuaca            C     C   UU AUG       uacuu 


Annotation confidence High
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Genome context
chrX: 4368483-4368581 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from dme-mir-983-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dme-miR-983-5p

Accession MIMAT0005499
Description Drosophila melanogaster dme-miR-983-5p mature miRNA
Sequence 21 - AUAAUACGUUUCGAACUAAUGA - 42
Evidence experimental
454 [1]
Database links
Predicted targets

Mature dme-miR-983-3p

Accession MIMAT0020880
Description Drosophila melanogaster dme-miR-983-3p mature miRNA
Sequence 57 - AUUAGGUAGUUACGCAUUAUCU - 78
Evidence not_experimental
Database links

References

  1. PubMed ID: 17989254
    Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
    "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
    "Genome Res (2007) 17:1850-1864