Stem-loop dme-mir-927

Accession

MI0005843

Description

Drosophila melanogaster dme-mir-927 precursor miRNA mir-927

Gene
family

RF00950; mir-927

Literature search

4 open access papers mention dme-mir-927
(5 sentences)

Sequence

39131 reads, 472 reads per million, 46 experiments

ugguugcuguagaguUUUAGAAUUCCUACGCUUUACCguggcauacgaaauucggCAAAGCGUUUGGAUUCUGAAACccuaccgauccauua
((((((..((((.((((((((((((..(((((((.(((..............))).)))))))..)))))))))))).))))))).)))...

Structure

---   -   cu    a            CU       A   uggcau 
   ugg uug  guag guUUUAGAAUUC  ACGCUUU CCg      a
   ||| |||  |||| ||||||||||||  ||||||| |||       
   acc agc  cauc CAAAGUCUUAGG  UGCGAAA ggc      c
auu   u   --    c            UU       C   uuaaag 

Annotation confidence High

Genome context

chrX: 15965947-15966038 [-]

Mature dme-miR-927-5p

• Accession: MIMAT0005501
• Description: Drosophila melanogaster dme-miR-927-5p mature miRNA
• Sequence: 16 - UUUAGAAUUCCUACGCUUUACC - 37
• Evidence: experimental ; 454 [1], Illumina [2]

Mature dme-miR-927-3p

• Accession: MIMAT0020882
• Description: Drosophila melanogaster dme-miR-927-3p mature miRNA
• Sequence: 56 - CAAAGCGUUUGGAUUCUGAAAC - 77
• Evidence: not_experimental

References

1. PubMed ID: 17989254
   Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
   "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
   "Genome Res (2007) 17:1850-1864


2. PubMed ID: 17989255
   Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes
   "Stark A, Kheradpour P, Parts L, Brennecke J, Hodges E, Hannon GJ, Kellis M"
   "Genome Res (2007) 17:1865-1879