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miRBase |
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Stem-loop sequence dme-mir-1001 |
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Accession | MI0005863 (change log) | ||||
Description | Drosophila melanogaster miR-1001 stem-loop | ||||
Gene family | MIPF0001048; mir-1001 | ||||
Literature search |
3 open access papers mention dme-mir-1001 | ||||
Stem-loop |
-aa - cu aacu a uggag 5' gcuggccu gucc gggua cccaaggauc gg a |||||||| |||| ||||| |||||||||| || 3' ugacugga cggg cucgu ggguuccuag cc u uga a cu cuuu c uaagu |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence dme-miR-1001-5p |
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Accession | MIMAT0005521 |
Previous IDs | dme-miR-1001 |
Sequence |
16 - uggguaaacucccaaggauca - 36 |
Deep sequencing | 10603 reads, 40 experiments |
Evidence | experimental; 454 [1] |
Database links |
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Predicted targets |
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Mature sequence dme-miR-1001-3p |
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Accession | MIMAT0020901 |
Sequence |
55 - auccuuggguuucugcucucgg - 76 |
Deep sequencing | 82 reads, 24 experiments |
Evidence | not experimental |
Database links |
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References |
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1 |
PMID:17989254
"Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs"
Genome Res. 17:1850-1864(2007).
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