Stem-loop sequence dme-mir-1006

Accession MI0005867
Description Drosophila melanogaster miR-1006 stem-loop
Gene family MIPF0000873; mir-1006
Stem-loop 
--      uu         augcg        u 
  gugagu  gaaauugaa     uaaauugu u
  ||||||  |||||||||     |||||||| g
  uacuua  cuuuagcuu     auuuaaca g
ga      uu         ---aa        u
Get sequence
Deep sequencing
4103 reads, 48 experiments
Genome context
Coordinates (BDGP5.0) Overlapping transcripts
2L: 16724795-16724858 [-]
sense
FBtr0080938 ; CG31782-RA; intron 2
FBtr0080939 ; CG31782-RB; intron 2
FBtr0080938 ; CG31782-RA; intron 2
FBtr0080939 ; CG31782-RB; intron 2
FBtr0080938 ; CG31782-RA; intron 2
FBtr0080939 ; CG31782-RB; intron 2
FBtr0080940 ; VhaSFD-RA; intron 3
FBtr0080942 ; VhaSFD-RD; intron 3
FBtr0080940 ; VhaSFD-RA; intron 3
FBtr0080942 ; VhaSFD-RD; intron 3
FBtr0080940 ; VhaSFD-RA; intron 3
FBtr0080942 ; VhaSFD-RD; intron 3
FBtr0080941 ; VhaSFD-RB; intron 4
FBtr0080941 ; VhaSFD-RB; intron 4
FBtr0080941 ; VhaSFD-RB; intron 4

Mature sequence dme-miR-1006-5p

Accession MIMAT0020903
Sequence

2 -  

ugaguuugaaauugaaaugcguaaa

 - 26

Get sequence
Deep sequencing 201 reads, 33 experiments
Evidence not experimental
Predicted targets

Mature sequence dme-miR-1006-3p

Accession MIMAT0005019
Previous IDs dme-miR-1006
Sequence

42 -  

uaaauucgauuucuuauucauag

 - 64

Get sequence
Deep sequencing 3899 reads, 48 experiments
Evidence experimental; 454 [1]
Predicted targets

References

1
PMID:17589500 "Intronic microRNA precursors that bypass Drosha processing" Ruby JG, Jan CH, Bartel DP Nature. 448:83-86(2007).