Stem-loop sequence dme-mir-1009

Accession MI0005870
Description Drosophila melanogaster miR-1009 stem-loop
Stem-loop 
-- u        g c   c     u   c g 
  g aaguguaa a uuu uugag uac c c
  | |||||||| | ||| ||||| ||| | g
  c uuuacauu u aaa aacuc aug g a
ga -        g u   -     u   a u
Get sequence
Deep sequencing
917 reads, 45 experiments
Genome context
Coordinates (BDGP5.0) Overlapping transcripts
2R: 19880577-19880637 [-]
sense
FBtr0072201 ; CG3860-RA; intron 6
FBtr0072201 ; CG3860-RA; intron 6
FBtr0072201 ; CG3860-RA; intron 6

Mature sequence dme-miR-1009-3p

Accession MIMAT0005022
Previous IDs dme-miR-1009
Sequence

39 -  

ucucaaaaauuguuacauuucag

 - 61

Get sequence
Deep sequencing 905 reads, 43 experiments
Evidence experimental; 454 [1]
Predicted targets

References

1
PMID:17589500 "Intronic microRNA precursors that bypass Drosha processing" Ruby JG, Jan CH, Bartel DP Nature. 448:83-86(2007).