miRBase entry: dme-mir-1013

Stem-loop dme-mir-1013


Accession
MI0005874
Description
Drosophila melanogaster dme-mir-1013 precursor miRNA
Gene family
MIPF0000985; mir-1013

Literature search
1 open access papers mention dme-mir-1013
(1 sentences)

Sequence

2103 reads, 62 reads per million, 49 experiments
gugaguuucguacacuuaauuaauaggaucggccguuaAUAAAAGUAUGCCGAACUCGcag
((((((((.(((.((((.((((((.((.....))))))))..)))).))).))))))))..

Structure
--        c   c    -a      a  a 
  gugaguuu gua acuu  auuaau gg u
  |||||||| ||| ||||  |||||| || c
  cGCUCAAG CGU UGAA  UAauug cc g
ga        C   A    AA      -  g 


Annotation confidence Not enough data
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Genome context
chr3R: 30791636-30791696 [-]

Database links

Mature dme-miR-1013-3p

Accession MIMAT0005026
Description Drosophila melanogaster dme-miR-1013-3p mature miRNA
Sequence 39 - AUAAAAGUAUGCCGAACUCG - 58
Evidence experimental
454 [1]
Database links
Predicted targets

References

  1. PubMed ID: 17589500
    Intronic microRNA precursors that bypass Drosha processing
    "Ruby JG, Jan CH, Bartel DP"
    "Nature (2007) 448:83-86