miRBase entry: dme-mir-1017

Stem-loop dme-mir-1017


Accession
MI0005878
Description
Drosophila melanogaster dme-mir-1017 precursor miRNA

Literature search
4 open access papers mention dme-mir-1017
(4 sentences)

Sequence

2385 reads, 187 reads per million, 41 experiments
gugaguuuaguggaguuuaaagcuucccaucgccagcaauuacgcGAAAGCUCUACCCAAACUCAUCCccc
((((((((.(((((((((...........((((..........)))))))))))))..)))))))).....

Structure
-----        -a         aaagcuuccca    cagc 
     gugaguuu  guggaguuu           ucgc    a
     ||||||||  |||||||||           ||||     
     UACUCAAA  CAUCUCGAA           AGcg    a
cccCC        CC         -----------    cauu 


Annotation confidence Not enough data
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Genome context
chr3R: 24488612-24488682 [+]

Database links

Mature dme-miR-1017-3p

Accession MIMAT0005030
Description Drosophila melanogaster dme-miR-1017-3p mature miRNA
Sequence 46 - GAAAGCUCUACCCAAACUCAUCC - 68
Evidence experimental
454 [1]
Database links
Predicted targets

References

  1. PubMed ID: 17589500
    Intronic microRNA precursors that bypass Drosha processing
    "Ruby JG, Jan CH, Bartel DP"
    "Nature (2007) 448:83-86