miRBase entry: ppt-MIR1066

Stem-loop ppt-MIR1066


Accession
MI0006032
Description
Physcomitrella patens ppt-MIR1066 precursor miRNA


Sequence

guugaagcguccgagcaugcgguuaccacucguaccccgcucaguaacaugugcgaacuuauuaucgcACAUGUUGCAGAGCGGGGUACaagugguggccgcguacucugcuacgauug
((((.((((...(((.((((((((((((((.(((((((((((.(((((((((((((........))))))))))))).))))))))))).)))))))))))))).))))))).))))..

Structure
--    a    ucc   c              c           a             acu 
  guug agcg   gag augcgguuaccacu guaccccgcuc guaacaugugcga   u
  |||| ||||   ||| |||||||||||||| ||||||||||| |||||||||||||    
  uagc ucgu   cuc ugcgccggugguga CAUGGGGCGAG CGUUGUACAcgcu   a
gu    a    ---   a              a           A             auu 


Annotation confidence Not enough data
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Genome context
Chr27: 2751812-2751930 [-]

Database links

Mature ppt-miR1066

Accession MIMAT0005193
Description Physcomitrella patens ppt-miR1066 mature miRNA
Sequence 69 - ACAUGUUGCAGAGCGGGGUAC - 89
Evidence experimental
454 [1]

References

  1. PubMed ID: 17601824
    Common functions for diverse small RNAs of land plants
    "Axtell MJ, Snyder JA, Bartel DP"
    "Plant Cell (2007) 19:1750-1769