miRBase entry: smo-MIR171b

Stem-loop smo-MIR171b


Accession
MI0006057
Description
Selaginella moellendorffii smo-MIR171b precursor miRNA
Gene family
MIPF0000030; MIR171_1


Sequence

ugugucugugauauugacaaggcucaaucaggcugcaaugcuacucgagcuaauuagugaugcugccagcuUGAGCCGUGCCAAUAUCACAUagauagcuagc
..((((((((((((((.((.(((((((.(.(((.(((.(((((...........))))).))).))).).))))))).)).)))))))))..)))))......

Structure
----ug     --         a  a       u a   u   a     cucg 
      ugucu  gugauauug ca ggcucaa c ggc gca ugcua    a
      |||||  ||||||||| || ||||||| | ||| ||| |||||    g
      auaga  CACUAUAAC GU CCGAGUu g ccg cgu gugau    c
cgaucg     UA         C  G       c a   u   a     uaau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature smo-miR171b

Accession MIMAT0005224
Description Selaginella moellendorffii smo-miR171b mature miRNA
Sequence 72 - UGAGCCGUGCCAAUAUCACAU - 92
Evidence experimental
454 [1]

References

  1. PubMed ID: 17601824
    Common functions for diverse small RNAs of land plants
    "Axtell MJ, Snyder JA, Bartel DP"
    "Plant Cell (2007) 19:1750-1769