miRBase entry: smo-MIR1082b

Stem-loop smo-MIR1082b


Accession
MI0006066
Description
Selaginella moellendorffii smo-MIR1082b precursor miRNA
Gene family
MIPF0000422; MIR1082


Sequence

uuugaggcagGUGUUGGCCUGCUGGCCGGCGacgagcucuagugcccgcgcaacgcuucgccguccagcaggccaauaccucacucgagaucuuguuucu
((((((..(((((((((((((((((.((((((..(((.....(((....)))..))))))))).)))))))))))))))))..))))))...........

Structure
-----------      gc                 C      cg   ucuag   c 
           uuugag  agGUGUUGGCCUGCUGG CGGCGa  agc     ugc c
           ||||||  ||||||||||||||||| ||||||  |||     |||  
           gagcuc  uccauaaccggacgacc gccgcu  ucg     acg g
ucuuuguucua      ac                 u      --   ---ca   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature smo-miR1082b

Accession MIMAT0005233
Description Selaginella moellendorffii smo-miR1082b mature miRNA
Sequence 11 - GUGUUGGCCUGCUGGCCGGCG - 31
Evidence experimental
454 [1]

References

  1. PubMed ID: 17601824
    Common functions for diverse small RNAs of land plants
    "Axtell MJ, Snyder JA, Bartel DP"
    "Plant Cell (2007) 19:1750-1769