miRBase entry: smo-MIR1085

Stem-loop smo-MIR1085


Accession
MI0006069
Description
Selaginella moellendorffii smo-MIR1085 precursor miRNA


Sequence

aucucucgagCCCCUACAAGAGAUAUCAAUCacgccacugcucccuguaaguuacagcgagcagugcaugaUUGAUAUGUCUUGUAGGGACuuagagagau
((((((((((.((((((((((.((((((((((.((.(((((((.(((((...))))).))))))))).)))))))))).)))))))))).))).)))))))

Structure
       -   C          G          c  c       c     a 
aucucuc gag CCCUACAAGA AUAUCAAUCa gc acugcuc cugua  
||||||| ||| |||||||||| |||||||||| || ||||||| ||||| g
uagagag uuC GGGAUGUUCU UAUAGUUagu cg ugacgag gacau  
       a   A          G          a  -       c     u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature smo-miR1085-5p

Accession MIMAT0005236
Description Selaginella moellendorffii smo-miR1085-5p mature miRNA
Sequence 11 - CCCCUACAAGAGAUAUCAAUC - 31
Evidence experimental
454 [1]

Mature smo-miR1085-3p

Accession MIMAT0005237
Description Selaginella moellendorffii smo-miR1085-3p mature miRNA
Sequence 72 - UUGAUAUGUCUUGUAGGGAC - 91
Evidence experimental
454 [1]

References

  1. PubMed ID: 17601824
    Common functions for diverse small RNAs of land plants
    "Axtell MJ, Snyder JA, Bartel DP"
    "Plant Cell (2007) 19:1750-1769