miRBase entry: smo-MIR1099

Stem-loop smo-MIR1099


Accession
MI0006086
Description
Selaginella moellendorffii smo-MIR1099 precursor miRNA


Sequence

gaugguucuucuuugucccaagcaUAUAGCAAUGGUGUUUUUGUCuacaaagugggugucuuggggcaggagaggcucgagaauuuuaguaccugaagaaaaucuaugcuaccuagaagagaguggacuagcagcuagggugaagguguagauuuuuucuacguacugaaauucuugauacaaccucucccaccccaaaacgccuaacuuguaagcaaaggcacuaucgcuguaugcuugggacaaagaaagacuauuaucaaguuaa
(((((((.((((((((((((((((((((((.(((((((((((((.(((((..(((((((.((((((..(((((((.((((((((((((((((.((.((((((((((((((.(((((..(..((....))..)..))))).....)))))))))))))).)).)))))))))))))))).....)))))))..)))))).)))))))..))))).))))))))))))).)))))))))))))))))))))).)))))))..........

Structure
----------       c                      A             C     ag       c      ca       ----c                c  a              ----a     aa ag  u 
          gaugguu uucuuugucccaagcaUAUAGC AUGGUGUUUUUGU uacaa  ugggugu uugggg  ggagagg     ucgagaauuuuaguac ug agaaaaucuaugcu     ccuag  g  ag g
          ||||||| |||||||||||||||||||||| ||||||||||||| |||||  ||||||| ||||||  |||||||     |||||||||||||||| || ||||||||||||||     |||||  |  ||  
          uuaucag aagaaacaggguucguaugucg uaucacggaaacg auguu  auccgca aacccc  ccucucc     aguucuuaaagucaug au uuuuuuagaugugg     ggauc  c  uc g
aauugaacua       a                      c             a     ca       a      ac       aacau                c  c              aagug     ga ga  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature smo-miR1099

Accession MIMAT0005255
Description Selaginella moellendorffii smo-miR1099 mature miRNA
Sequence 25 - UAUAGCAAUGGUGUUUUUGUC - 45
Evidence experimental
454 [1]

References

  1. PubMed ID: 17601824
    Common functions for diverse small RNAs of land plants
    "Axtell MJ, Snyder JA, Bartel DP"
    "Plant Cell (2007) 19:1750-1769