miRBase entry: smo-MIR1103

Stem-loop smo-MIR1103


Accession
MI0006103
Description
Selaginella moellendorffii smo-MIR1103 precursor miRNA


Sequence

gcccaugaacAAGAGUGCACCCCCUUUCCAAUcgguuaaaggucuuaggauaguuggaguuuaagcguccuuggguuugaauaguacugggcugggugaccucccgggaaguccaaauucaggagcuuacauuaaccccaaguauuccaaaacgcuuaaucgauUGGAAAAAGGAGGUGCAUUCUUGUucauaggccc
(((.(((((((((((((((((.(((((((((((((((((..((.((.(((((.((((.((((((((.((((.(((((((.((....(((((..((....)).)))))...)).))))))))))))))))....))).)))).))))).)).))..)))))))))))))..)))).))))))))))))))))).)))..

Structure
--   c                 C    --             ag  c  a     g    a   ----     g    u       a  agua     cu  g 
  gcc augaacAAGAGUGCACC CCUU  UCCAAUcgguuaa  gu uu ggaua uugg guu    uaagc uccu ggguuug au    cuggg  gg u
  ||| ||||||||||||||||| ||||  |||||||||||||  || || ||||| |||| |||    ||||| |||| ||||||| ||    |||||  ||  
  cgg uacuUGUUCUUACGUGG GGAA  AGGUuagcuaauu  ca aa cuuau aacc caa    auucg agga cuuaaac ug    ggccc  cc g
cc   a                 A    AA             cg  a  c     g    c   uuac     -    -       c  -aag     -u  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature smo-miR1103-5p

Accession MIMAT0005275
Description Selaginella moellendorffii smo-miR1103-5p mature miRNA
Sequence 11 - AAGAGUGCACCCCCUUUCCAAU - 32
Evidence experimental
454 [1]

Mature smo-miR1103-3p

Accession MIMAT0005276
Description Selaginella moellendorffii smo-miR1103-3p mature miRNA
Sequence 165 - UGGAAAAAGGAGGUGCAUUCUUGU - 188
Evidence experimental
454 [1]

References

  1. PubMed ID: 17601824
    Common functions for diverse small RNAs of land plants
    "Axtell MJ, Snyder JA, Bartel DP"
    "Plant Cell (2007) 19:1750-1769