Stem-loop rno-mir-147

Accession

MI0006130

Description

Rattus norvegicus rno-mir-147 precursor miRNA

Gene family

MIPF0000105; mir-147

Literature search

3 open access papers mention rno-mir-147
(23 sentences)

Sequence

9053 reads, 41 reads per million, 376 experiments

uaugaaucuaguggaaacacuucugcacaaacucgauuuugaugccaGUGUGCGGAAAUGCUUCUGCUAcauuuuuagg
...((((.((((((((.((.(((((((((..((((....))).)....))))))))).)).)))))))).)))).....

Structure

--uau    c        a  c         --aa -   a 
     gaau uaguggaa ca uucugcaca    c ucg u
     |||| |||||||| || |||||||||    | |||  
     uuua AUCGUCUU GU AAGGCGUGU    g agu u
ggauu    c        C  A         Gacc u   u 

Annotation confidence Not enough data

Genome context

chr3: 114775343-114775421 [+]

Mature rno-miR-147

• Accession: MIMAT0005297
• Description: Rattus norvegicus rno-miR-147 mature miRNA
• Sequence: 48 - GUGUGCGGAAAUGCUUCUGCUA - 69
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414