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miRBase |
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Stem-loop sequence rno-mir-181d |
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Accession | MI0006132 (change log) | |||||
Description | Rattus norvegicus miR-181d stem-loop | |||||
Gene family | MIPF0000007; mir-181 | |||||
Literature search |
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25 open access papers mention rno-mir-181d | |||||
Stem-loop |
--- auua g ug guga ag 5' ggucaca acauucauu u ucgguggguu gg a ||||||| ||||||||| | |||||||||| || 3' ucggugu uguaaguag g ggccacccag cc a ggg -cac g -- ---a ag |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence rno-miR-181d-5p |
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Accession | MIMAT0005299 |
Previous IDs | rno-miR-181d |
Sequence |
11 - aacauucauuguugucggugggu - 33 |
Deep sequencing | 2624827 reads, 508 experiments |
Evidence | experimental; cloned [1], SOLiD [2] |
Predicted targets |
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Mature sequence rno-miR-181d-3p |
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Accession | MIMAT0017296 |
Previous IDs | rno-miR-181d* |
Sequence |
53 - ccaccgggggaugaauguca - 72 |
Deep sequencing | 173 reads, 110 experiments |
Evidence | experimental; SOLiD [2] |
Predicted targets |
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References |
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1 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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2 |
PMID:20403161
"Small RNA expression and strain specificity in the rat"
BMC Genomics. 11:249(2010).
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