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miRBase |
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Stem-loop sequence rno-mir-434-1 |
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Accession | MI0006147 (change log) | |||||||||||||||||||||||||
Previous IDs | rno-mir-434 | |||||||||||||||||||||||||
Description | Rattus norvegicus miR-434-1 stem-loop | |||||||||||||||||||||||||
Gene family | MIPF0000439; mir-434 | |||||||||||||||||||||||||
Literature search |
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7 open access papers mention rno-mir-434-1 | |||||||||||||||||||||||||
Stem-loop |
- ug -c c c c ug -u u 5' guu aacca ag ucga u augguu aaccau g c ||| ||||| || |||| | |||||| |||||| | a 3' uaa uuggu uc agcu a uaccaa uuggug c a c gu cc - c c gu cu a |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence rno-miR-434-5p |
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Accession | MIMAT0017307 |
Previous IDs | rno-miR-434* |
Sequence |
12 - agcucgacucaugguuugaacca - 34 |
Deep sequencing | 476028 reads, 426 experiments |
Evidence | experimental; SOLiD [2] |
Mature sequence rno-miR-434-3p |
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Accession | MIMAT0005315 |
Previous IDs | rno-miR-434 |
Sequence |
50 - uuugaaccaucacucgacuccu - 71 |
Deep sequencing | 10066396 reads, 486 experiments |
Evidence | experimental; cloned [1], SOLiD [2] |
References |
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1 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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2 |
PMID:20403161
"Small RNA expression and strain specificity in the rat"
BMC Genomics. 11:249(2010).
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