![]() |
miRBase |
![]() |
![]() |
Stem-loop sequence rno-mir-500 |
||||||||||
Accession | MI0006153 (change log) | |||||||||
Description | Rattus norvegicus miR-500 stem-loop | |||||||||
Gene family | MIPF0000139; mir-500 | |||||||||
Literature search |
![]()
10 open access papers mention rno-mir-500 | |||||||||
Stem-loop |
-cc c - uau ug uuag uau 5' cc ucucu aauccuugc c ggugc ugc c || ||||| ||||||||| | ||||| ||| u 3' gg agaga uugggaacg g ccacg acg c agu a c --- gu --ua uaa |
|||||||||
Deep sequencing |
| |||||||||
Confidence |
Annotation confidence: high
| |||||||||
Genome context |
|
|||||||||
Clustered miRNAs |
|
|||||||||
Database links |
Mature sequence rno-miR-500-5p |
|
Accession | MIMAT0017311 |
Previous IDs | rno-miR-500* |
Sequence |
11 - aauccuugcuaucugggugcuuag - 34 |
Deep sequencing | 244 reads, 146 experiments |
Evidence | experimental; SOLiD [2] |
Predicted targets |
|
Mature sequence rno-miR-500-3p |
|
Accession | MIMAT0005321 |
Previous IDs | rno-miR-500 |
Sequence |
49 - aaugcaccugggcaaggguuca - 70 |
Deep sequencing | 12014 reads, 480 experiments |
Evidence | experimental; cloned [1], SOLiD [2] |
Predicted targets |
|
References |
|
1 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
|
2 |
PMID:20403161
"Small RNA expression and strain specificity in the rat"
BMC Genomics. 11:249(2010).
|