Stem-loop sequence rno-mir-532

Accession MI0006154
Description Rattus norvegicus miR-532 stem-loop
Gene family MIPF0000113; mir-188
Stem-loop 
--uu       c  u      a    a   ---cu     c 
    uucucuu ca gccuug gugu gga     guuga a
    ||||||| || |||||| |||| |||     |||||  
    gagagga gu cggaac caca ccu     uaauu u
gaac       c  u      c    c   cccau     c
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Genome context
Coordinates (RGSC3.4) Overlapping transcripts
X: 27323147-27323225 [+]
intergenic
Clustered miRNAs
< 10kb from rno-mir-532
rno-mir-532 X: 27323147-27323225 [+]
rno-mir-188 X: 27323547-27323626 [+]
rno-mir-362 X: 27330447-27330511 [+]
rno-mir-3560 X: 27331140-27331251 [-]
rno-mir-501 X: 27331151-27331234 [+]
Database links
  • ENTREZGENE: 100314265;Mir532

Mature sequence rno-miR-532-5p

Accession MIMAT0005322
Sequence

11 -  

caugccuugaguguaggacugu

 - 32

Get sequence
Evidence experimental; cloned [1], SOLiD [2]
Predicted targets

Mature sequence rno-miR-532-3p

Accession MIMAT0005323
Sequence

48 -  

ccucccacacccaaggcuugca

 - 69

Get sequence
Evidence experimental; cloned [1], SOLiD [2]
Predicted targets

References

1
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
2
PMID:20403161 "Small RNA expression and strain specificity in the rat" Linsen SE, de Wit E, de Bruijn E, Cuppen E BMC Genomics. 11:249(2010).