Stem-loop rno-mir-760

Accession

MI0006164

Description

Rattus norvegicus rno-mir-760 precursor miRNA

Literature search

6 open access papers mention rno-mir-760
(32 sentences)

Sequence

2525 reads, 5 reads per million, 201 experiments

ggcgcgucgccCCCCUCAGGCCACCAGAGCCCGgauaccucagaaauuCGGCUCUGGGUCUGUGGGGAgcgaaaugcaac
.(((..((((.((((.((((((..(((((((.((((.........))))))))))))))))).)))).))))..)))...

Structure

--g   cg    c    U      AC       C    acc 
   gcg  ucgc CCCC CAGGCC  CAGAGCC Ggau   u
   |||  |||| |||| ||||||  ||||||| ||||   c
   cgu  agcg GGGG GUCUGG  GUCUCGG Cuua   a
caa   aa    A    U      --       -    aag 

Annotation confidence High

Genome context

chr2: 225873354-225873433 [-]

Mature rno-miR-760-5p

• Accession: MIMAT0005336
• Description: Rattus norvegicus rno-miR-760-5p mature miRNA
• Sequence: 12 - CCCCUCAGGCCACCAGAGCCCG - 33
• Evidence: experimental ; cloned [1], SOLiD [2]

Mature rno-miR-760-3p

• Accession: MIMAT0005337
• Description: Rattus norvegicus rno-miR-760-3p mature miRNA
• Sequence: 49 - CGGCUCUGGGUCUGUGGGGA - 68
• Evidence: experimental ; cloned [1], SOLiD [2]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249