miRBase entry: tae-MIR1130a

Stem-loop tae-MIR1130a


Accession
MI0006192
Description
Triticum aestivum tae-MIR1130a precursor miRNA
Gene family
MIPF0000344; MIR818

Literature search
5 open access papers mention tae-MIR1130a
(12 sentences)

Sequence

2671 reads, 39 reads per million, 116 experiments
aaaugucuuauacucCCUCCGUCUCGUAAUGUAAGACGuuuuuauaagcuauguuagucuguaaaaaaaagucuuugcaaaaacgucuuacauuaugggacggagugguaguauuugcaacg
...((.(..(((((((((((((((((((((((((((((((((.....((((...)))).((((((........)))))))))))))))))))))))))))))))).)).)))))..)))...

Structure
aaa  u uu     -  -                          uauaagcuauguuaguc      aaa 
   ug c  auacu cC CUCCGUCUCGUAAUGUAAGACGuuuu                 uguaaa   a
   || |  ||||| || ||||||||||||||||||||||||||                 ||||||    
   ac g  uauga gg gaggcaggguauuacauucugcaaaa                 acguuu   a
gca  - uu     u  u                          -----------------      cug 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Yao et al. misname this sequence miR514 in [1]. miR1130 is unrelated to mammalian miR-514;

Genome context
Unknown

Database links

Mature tae-miR1130a

Accession MIMAT0005365
Description Triticum aestivum tae-miR1130a mature miRNA
Sequence 16 - CCUCCGUCUCGUAAUGUAAGACG - 38
Evidence experimental
cloned [1], Northern [1]

References

  1. PubMed ID: 17543110
    Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)
    Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q
    Genome Biol (2007) 8:R96