miRBase entry: tae-MIR1135

Stem-loop tae-MIR1135


Accession
MI0006197
Description
Triticum aestivum tae-MIR1135 precursor miRNA
Gene family
MIPF0000382; MIR1122

Literature search
9 open access papers mention tae-MIR1135
(19 sentences)

Sequence

83527 reads, 566 reads per million, 116 experiments
cuacucccuccauucggaauuacuugucucggauauggauguaucuagaacuaaaauacgucuagauacaucuauuuCUGCGACAAGUAAUUCCGAACGGAgggaguag
(((((((((((.((((((((((((((((.((((.(((((((((((((((.(........)))))))))))))))).)))).)))))))))))))))).)))))))))))

Structure
           a                u    u               a uaa 
cuacucccucc uucggaauuacuuguc cgga auggauguaucuaga c   a
||||||||||| |||||||||||||||| |||| ||||||||||||||| |    
gaugagggAGG AAGCCUUAAUGAACAG GUCu uaucuacauagaucu g   a
           C                C    u               - cau 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Yao et al. misname this sequence miR519 in [1]. miR1135 is unrelated to mammalian miR-519;

Genome context
1A: 203987144-203987252 [-]

Database links

Mature tae-miR1135

Accession MIMAT0005370
Description Triticum aestivum tae-miR1135 mature miRNA
Sequence 78 - CUGCGACAAGUAAUUCCGAACGGA - 101
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17543110
    Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)
    Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q
    Genome Biol (2007) 8:R96