Stem-loop cre-MIR1143

Accession

MI0006204

Description

Chlamydomonas reinhardtii cre-MIR1143 precursor miRNA

Sequence

AGGACGUCCCCUUACGGGAauauaaauauuaguggcagugguaccgccacugccuauauuuauauacuccgaaggaacuuguuagccgauaggcgaggcaacaaauuuauuuauuguauauaaauauccacuaaaauUUAUUUGCCCGAAGGGGACGUCCU
(((((((((((((.((((...((((((.((((((((((((((...))))))))).((((((((((((...(((.(((.(((((.(((.........)))))))).))).)))...))))))))))))..))))).))))))...)))))))))))))))))

Structure

             A    Aau      a     ggcagugguaccgccacugccu            ucc   g   c     a   gau 
AGGACGUCCCCUU CGGG   auaaau uuagu                      auauuuauauac   gaa gaa uuguu gcc   a
||||||||||||| ||||   |||||| |||||                      ||||||||||||   ||| ||| ||||| |||   g
UCCUGCAGGGGAA GCCC   UAUUua aauca                      uauaaauauaug   uuu uuu aacaa cgg   g
             -    GUU      a     --------------------cc            uua   a   a     -   agc 

Annotation confidence Not enough data

Genome context

Unknown

Mature cre-miR1143-5p

• Accession: MIMAT0005377
• Description: Chlamydomonas reinhardtii cre-miR1143-5p mature miRNA
• Sequence: 1 - AGGACGUCCCCUUACGGGA - 19
• Evidence: experimental ; cloned [1]

Mature cre-miR1143-3p

• Accession: MIMAT0005378
• Description: Chlamydomonas reinhardtii cre-miR1143-3p mature miRNA
• Sequence: 138 - UUAUUUGCCCGAAGGGGACGUCCU - 161
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17538623
   miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii
   "Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC"
   "Nature (2007) 447:1126-1129