Stem-loop cre-MIR1156

Accession

MI0006218

Description

Chlamydomonas reinhardtii cre-MIR1156 precursor miRNA

Sequence

ucugaucugccugaagcuccaguugaaaccuggcaaggucgugugcccucuccaccgacaugcgaggguccaccgccguguggcacaggcuaccaugguagccagucugcgcaccugcagccagcagcugaauucaucagcugucggcugcaggugcgcagacuggcuaccuucgaagccugggccucacggcggUGGACCCUCGCAUGUCCGUGAagggggcucaugacccuacccaguUUCAGCUGGAGCUUCAGGCACaucaga
((((((.((((((((((((((((((((((.(((...(((((((.(((((((.(((.((((((((((((((((((((((((.(((.((((((.(...((((((((((((((((((((((((((.((((((((.....)))))))).))))))))))))))))))))))))))...).)))))).))).)))))))))))))))))))))))).))).))))))).)))))))....))))))))))))))))))))))))).))))))

Structure

      c                      c   -caa       u       c   c                        u   a      a cau                          a        a 
ucugau ugccugaagcuccaguugaaac ugg    ggucgug gcccucu cac gacaugcgaggguccaccgccgug ggc caggcu c   gguagccagucugcgcaccugcagcc gcagcuga u
|||||| |||||||||||||||||||||| |||    ||||||| ||||||| ||| |||||||||||||||||||||||| ||| |||||| |   |||||||||||||||||||||||||| |||||||| u
agacua ACGGACUUCGAGGUCGACUUug acc    ccaguac cggggga GUG CUGUACGCUCCCAGGUggcggcac ccg guccga g   ccaucggucagacgcguggacgucgg ugucgacu c
      C                      -   cauc       u       A   C                        u   g      a cuu                          c        a 

Annotation confidence Not enough data

Genome context

scaffold_16: 1919702-1919968 [+]

Mature cre-miR1156.1

• Accession: MIMAT0005405
• Description: Chlamydomonas reinhardtii cre-miR1156.1 mature miRNA
• Sequence: 196 - UGGACCCUCGCAUGUCCGUGA - 216
• Evidence: experimental ; cloned [1]

Mature cre-miR1156.2

• Accession: MIMAT0005406
• Description: Chlamydomonas reinhardtii cre-miR1156.2 mature miRNA
• Sequence: 241 - UUCAGCUGGAGCUUCAGGCAC - 261
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17538623
   miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii
   "Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC"
   "Nature (2007) 447:1126-1129