Stem-loop sequence aga-mir-989

Accession

MI0006242 (change log)

Description

Anopheles gambiae miR-989 stem-loop

Gene family

MIPF0000885; mir-989

Literature search

6 open access papers mention aga-mir-989
(36 sentences)

Stem-loop

   ggaca  aca    c        uac          ug uu    u   uacgcucguauaguauag 
5'      gu   gugg cacggggg   gccgcuacgu  c  ucac ugg                  a
        ||   |||| ||||||||   ||||||||||  |  |||| |||                   
3'      ca   uauc gugcccuc   uggugaugca  g  agug acc                  g
   --caa  --c    u        cca          gu -u    u   uagauacaaaugaaaauc 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (AgamP3; GCA_000005575.1): chr3L: 2905395-2905525 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0006242

Mature sequence aga-miR-989

• Accession: MIMAT0005529
• Sequence: 91 - ugugaugugacguagugguac - 111
• Evidence: experimental; cloned [1]

References

1. PMID:17933784 "Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion" Winter F, Edaye S, Huttenhofer A, Brunel C Nucleic Acids Res. 35:6953-6962(2007).