miRBase entry: mcmv-mir-M44-1

Stem-loop mcmv-mir-M44-1


Accession
MI0006254
Description
Mouse cytomegalovirus mcmv-mir-M44-1 precursor miRNA


Sequence

acgaccgcgagcuccggagaaggaaacugucgcuccgaucgUAUCUUUUUCCAGAGCCGCGGUcgu
(((((((((.((((.(((((((((.((.((((...)))).)).))))))))).)))))))))))))

Structure
         a    c         a  u    c 
acgaccgcg gcuc ggagaagga ac gucg  
||||||||| |||| ||||||||| || |||| u
ugcUGGCGC CGAG CCUUUUUCU Ug uagc  
         -    A         A  c    c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature mcmv-miR-M44-1

Accession MIMAT0005546
Description Mouse cytomegalovirus mcmv-miR-M44-1 mature miRNA
Sequence 42 - UAUCUUUUUCCAGAGCCGCGGU - 63
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17942535
    Mouse cytomegalovirus microRNAs dominate the cellular small RNA profile during lytic infection and show features of posttranscriptional regulation
    "Dolken L, Perot J, Cognat V, Alioua A, John M, Soutschek J, Ruzsics Z, Koszinowski U, Voinnet O, Pfeffer S"
    "J Virol (2007) 81:13771-13782