miRBase entry: mcmv-mir-M55-1

Stem-loop mcmv-mir-M55-1


Accession
MI0006255
Description
Mouse cytomegalovirus mcmv-mir-M55-1 precursor miRNA


Sequence

ccUGGUGAUCGGCGUGCUAGCCGUcguguaucucaucuucacgaggcagcggucggccgccgcgagg
(((((((.(((((.((((.(((.(((((...........))))))))))))))))).))))...)))

Structure
   ---    A     G    A   G     uauc 
ccU   GGUG UCGGC UGCU GCC Ucgug    u
|||   |||| ||||| |||| ||| |||||    c
gga   ccgc ggcug gcga cgg agcac    a
   gcg    c     -    -   -     uucu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature mcmv-miR-M55-1

Accession MIMAT0005547
Description Mouse cytomegalovirus mcmv-miR-M55-1 mature miRNA
Sequence 3 - UGGUGAUCGGCGUGCUAGCCGU - 24
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17942535
    Mouse cytomegalovirus microRNAs dominate the cellular small RNA profile during lytic infection and show features of posttranscriptional regulation
    "Dolken L, Perot J, Cognat V, Alioua A, John M, Soutschek J, Ruzsics Z, Koszinowski U, Voinnet O, Pfeffer S"
    "J Virol (2007) 81:13771-13782