miRBase entry: mcmv-mir-m59-1

Stem-loop mcmv-mir-m59-1


Accession
MI0006256
Description
Mouse cytomegalovirus mcmv-mir-m59-1 precursor miRNA


Sequence

cugucggccgaggcacugcuccuuuugagcgguagugcaaaauUUAGCAGUGCCUCGACCGUCAG
(((.(((.((((((((((((..(((((.((....)).)))))...)))))))))))).))).)))

Structure
   u   c            -cc     a  g 
cug cgg cgaggcacugcu   uuuug gc g
||| ||| ||||||||||||   ||||| ||  
GAC GCC GCUCCGUGACGA   aaaac ug u
   U   A            UUu     g  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature mcmv-miR-m59-1

Accession MIMAT0005548
Description Mouse cytomegalovirus mcmv-miR-m59-1 mature miRNA
Sequence 44 - UUAGCAGUGCCUCGACCGUCAG - 65
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17942535
    Mouse cytomegalovirus microRNAs dominate the cellular small RNA profile during lytic infection and show features of posttranscriptional regulation
    "Dolken L, Perot J, Cognat V, Alioua A, John M, Soutschek J, Ruzsics Z, Koszinowski U, Voinnet O, Pfeffer S"
    "J Virol (2007) 81:13771-13782