Stem-loop sequence mmu-mir-1187

Accession

MI0006285 (change log)

Symbol

MGI:Mir1187

Description

Mus musculus miR-1187 stem-loop

Literature search

9 open access papers mention mmu-mir-1187
(47 sentences)

Stem-loop

   ucauauaguauuaaaccga        ccuuaua    caauuuauu          c               u 
5'                    acuguuuu       gaca         uuuacacaca acacacacacauaua a
                      ||||||||       ||||         |||||||||| |||||||||||||||  
3'                    ugauaaaa       uugu         aaaugugugu uguguguguguauau u
   ------------------a        -------    ---aacaau          a               a 

Deep sequencing

3417 reads, 5.11e+03 reads per million, 162 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr5: 82798944-82799065 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir1187
• MGI:Mir1187
• RNAcentral:URS000075DFC2_10090
• miRBase Tracker:MI0006285

Mature sequence mmu-miR-1187

• Accession: MIMAT0005837
• Sequence: 80 - uauguguguguguauguguguaa - 102
• Deep sequencing: 910 reads, 118 experiments
• Evidence: experimental; 454 [1]
• Database links:
  • RNAcentral:URS0000199A33_10090
• Predicted targets:
  • TargetScanVert:mmu-miR-1187
  • miRDB:mmu-miR-1187
  • microrna.org:mmu-miR-1187

References

1. PMID:17989215 "RNA sequence analysis defines Dicer's role in mouse embryonic stem cells" Calabrese JM, Seila AC, Yeo GW, Sharp PA Proc Natl Acad Sci U S A. 104:18097-18102(2007).