miRBase entry: ptr-mir-1224

Stem-loop ptr-mir-1224


Accession
MI0006309
Description
Pan troglodytes ptr-mir-1224 precursor miRNA
Gene family
MIPF0000440; mir-1224


Sequence

GUGAGGACUCGGGAGGUGGAGGGUggugccgccggggccgggcgcuguuucagcucgcuucuccCCCCACCUCCUCUCUCCUCAG
.((((((...(((((((((..((((....))))((((..((((((((...))))..))))..)))))))))))))...)))))).

Structure
G      CUC         -------------------------------AG    g 
 UGAGGA   GGGAGGUGG                                 GGUg u
 ||||||   |||||||||                                 ||||  
 ACUCCU   UCCUCCACC                                 ccgc g
G      CUC         CCccucuucgcucgacuuugucgcgggccgggg    c 


Annotation confidence Not enough data
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Genome context
chr3: 188230294-188230378 [+]

Database links

Mature ptr-miR-1224-5p

Accession MIMAT0005568
Description Pan troglodytes ptr-miR-1224-5p mature miRNA
Sequence 1 - GUGAGGACUCGGGAGGUGGAGGGU - 24
Evidence experimental
cloned [1]

Mature ptr-miR-1224-3p

Accession MIMAT0005569
Description Pan troglodytes ptr-miR-1224-3p mature miRNA
Sequence 65 - CCCCACCUCCUCUCUCCUCAG - 85
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17964270
    Mammalian mirtron genes
    "Berezikov E, Chung WJ, Willis J, Cuppen E, Lai EC"
    "Mol Cell (2007) 28:328-336