Stem-loop hsa-mir-548e

Accession

MI0006344

Symbol

HGNC: MIR548E

Description

Homo sapiens hsa-mir-548e precursor miRNA

Gene family

MIPF0000317; mir-548

Literature search

45 open access papers mention hsa-mir-548e
(194 sentences)

Sequence

8079 reads, 151 reads per million, 80 experiments

uuauuagguugguaCAAAAGCAAUCGCGGUUUUUGCuauuacuuuuaaaggcAAAAACUGAGACUACUUUUGCAccaaccugauagaa
(((((((((((((.((((((...((.(((((((((((.(((....))).))))))))))).))...)))))).)))))))))))))..

Structure

--             a      CAA  G           a   c 
  uuauuagguuggu CAAAAG   UC CGGUUUUUGCu uua u
  ||||||||||||| ||||||   || ||||||||||| |||  
  gauaguccaaccA GUUUUC   AG GUCAAAAAcgg aau u
aa             C      AUC  A           a   u 

Annotation confidence High

Genome context

chr10: 110988926-110989013 [+]

Disease association

hsa-mir-548e is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-548e-3p

• Accession: MIMAT0005874
• Description: Homo sapiens hsa-miR-548e-3p mature miRNA
• Sequence: 53 - AAAAACUGAGACUACUUUUGCA - 74
• Evidence: experimental ; Illumina [1-2]

Mature hsa-miR-548e-5p

• Accession: MIMAT0026736
• Description: Homo sapiens hsa-miR-548e-5p mature miRNA
• Sequence: 15 - CAAAAGCAAUCGCGGUUUUUGC - 36
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18285502
   Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
   "Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA"
   "Genome Res (2008) 18:610-621


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45