Stem-loop sequence hsa-mir-1291

Accession

MI0006353 (change log)

Symbol

HGNC:MIR1291

Description

Homo sapiens miR-1291 stem-loop

Gene family

MIPF0000599; mir-1291

Literature search

11 open access papers mention hsa-mir-1291
(122 sentences)

Stem-loop

   --  u   -au   -agu    -   a  ga           ug   
5'   gg aga   ucc    ggcc cug cu  agaccagcagu  ua 
     || |||   |||    |||| ||| ||  |||||||||||  | c
3'   cc ucu   agg    ccgg gac ga  uuugguugucg  gu 
   gu  u   guc   aaau    a   -  ac           gu   

Deep sequencing

3644 reads, 8.15 reads per million, 135 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr12: 48654444-48654530 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000406515 ; RP11-370I10.2-001; intron 2

  ENST00000547523 ; RP11-370I10.2-001; intron 2

Database links

• EntrezGene:MIR1291
• HGNC:MIR1291
• RNAcentral:URS000075D26F_9606
• miRBase Tracker:MI0006353

Mature sequence hsa-miR-1291

• Accession: MIMAT0005881
• Sequence: 14 - uggcccugacugaagaccagcagu - 37
• Deep sequencing: 3545 reads, 129 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS000047E28E_9606
• Predicted targets:
  • TargetMiner:hsa-miR-1291
  • TargetScanVert:hsa-miR-1291
  • miRDB:hsa-miR-1291
  • microrna.org:hsa-miR-1291

References

1. PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).