Stem-loop sequence hsa-mir-1299

Accession

MI0006359 (change log)

Symbol

HGNC:MIR1299

Description

Homo sapiens miR-1299 stem-loop

Gene family

MIPF0000625; mir-1299

Literature search

9 open access papers mention hsa-mir-1299
(19 sentences)

Stem-loop

   --       g   u    ug    ---c       a  gacaau 
5'   ccucaug cag guuc  gaau    cuacgug gg      c
     ||||||| ||| ||||  ||||    ||||||| ||       
3'   ggagugu guc uaag  cuug    gaugcac cc      a
   ag       -   u    gu    ugac       -  agacuu 

Deep sequencing

5641 reads, 6.02 reads per million, 133 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr9: 40929010-40929092 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR1299
• HGNC:MIR1299
• RNAcentral:URS000075D629_9606
• miRBase Tracker:MI0006359

Mature sequence hsa-miR-1299

• Accession: MIMAT0005887
• Sequence: 62 - uucuggaauucugugugaggga - 83
• Deep sequencing: 4578 reads, 121 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS00002F74F1_9606
• Predicted targets:
  • TargetMiner:hsa-miR-1299
  • TargetScanVert:hsa-miR-1299
  • miRDB:hsa-miR-1299
  • microrna.org:hsa-miR-1299

References

1. PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).