miRBase entry: hsa-mir-1250

Stem-loop hsa-mir-1250


Accession
MI0006385
Symbol
HGNC: MIR1250
Description
Homo sapiens hsa-mir-1250 precursor miRNA
Gene family
MIPF0000696; mir-1250

Literature search
5 open access papers mention hsa-mir-1250
(5 sentences)

Sequence

817 reads, 16 reads per million, 45 experiments
cugucccgcuggccuggcaggugACGGUGCUGGAUGUGGCCUUUuugccuuuucuaaaggccACAUUUUCCAGCCCAUUCAaccuuccagagcccucugaaguggccacaggc
((((.((((((((((((.((((((.((.((((((((((((((((...........))))))))))...))))))))..)).)))).)))).)))......)))))..))))..

Structure
--    -c     ------   -    c    -  -C  U      ---          uugc 
  cugu  ccgcu      ggc cugg aggu gA  GG GCUGGA   UGUGGCCUUU    c
  ||||  |||||      ||| |||| |||| ||  || ||||||   ||||||||||    u
  gaca  gguga      ccg gacc ucca CU  CC CGACCU   ACAccggaaa    u
cg    cc     agucuc   a    u    A  UA  -      UUU          ucuu 


Annotation confidence Not enough data
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Genome context
chr17: 81133196-81133308 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from hsa-mir-1250
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-1250 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-1250-5p

Accession MIMAT0005902
Description Homo sapiens hsa-miR-1250-5p mature miRNA
Sequence 24 - ACGGUGCUGGAUGUGGCCUUU - 44
Evidence experimental
Illumina [1-2]
Database links
Predicted targets

Mature hsa-miR-1250-3p

Accession MIMAT0026740
Description Homo sapiens hsa-miR-1250-3p mature miRNA
Sequence 63 - ACAUUUUCCAGCCCAUUCA - 81
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18285502
    Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
    "Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA"
    "Genome Res (2008) 18:610-621

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45