Stem-loop sequence hsa-mir-548i-3

AccessionMI0006423 (change log)
Symbol HGNC:MIR548I3
DescriptionHomo sapiens miR-548i-3 stem-loop
Gene family MIPF0000317; mir-548
Literature search

42 open access papers mention hsa-mir-548i-3
(142 sentences)

Stem-loop 
   -c         -----        -----------acaucc         u                gga           a 
5'   agauggcuc     cgaaguuu                 uauuagguu gugcaaaaguaauugc   uuuugccauua a
     |||||||||     ||||||||                 ||||||||| ||||||||||||||||   |||||||||||  
3'   ucuaccgag     guuucaaa                 augauccga cauguuuuuauuaacg   aaaacgguaau a
   ac         ucccu        ccaucuuccucuuuucu         c                aua           g
Get sequence
Deep sequencing
9229 reads, 17.6 reads per million, 148 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr8: 8088941-8089089 [-]
antisense
OTTHUMT00000374768 ; RP11-556O5.3-002; intron 2
OTTHUMT00000448493 ; RP11-556O5.3-003; intron 2
OTTHUMT00000374860 ; RP11-556O5.3-001; intron 2
ENST00000522601 ; FAM86B3P-002; intron 2
ENST00000588728 ; FAM86B3P-003; intron 2
ENST00000523992 ; FAM86B3P-001; intron 2
Database links

Mature sequence hsa-miR-548i

Accession MIMAT0005935
Sequence

39 -  

aaaaguaauugcggauuuugcc

 - 60

Get sequence
Deep sequencing37421 reads, 148 experiments
Evidence experimental; Illumina [1]
Database links
Predicted targets

References

1
PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).