Stem-loop bna-MIR171a

Accession

MI0006450

Description

Brassica napus bna-MIR171a precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

5 open access papers mention bna-MIR171a
(16 sentences)

Sequence

uggucaagcgagauauuagugcgguucaaucaaauagucucacucuuaguugauagagauugauuuuguucgaUUGAGCCGUGCCAAUAUCACGcauauaacca
((((...(((.((((((.(((((((((((((.(((((..(((.((((........)))).)))..))))).))))))))))))).)))))).))).....))))

Structure

    --caa   a      a             a     uc   c    agu 
uggu     gcg gauauu gugcgguucaauc aauag  uca ucuu   u
||||     ||| |||||| ||||||||||||| |||||  ||| ||||    
acca     cGC CUAUAA CGUGCCGAGUUag uuguu  agu agag   g
    auaua   A      C             c     uu   u    aua 

Annotation confidence Not enough data

Genome context

EM:DY013547: 260-363 [+]

Mature bna-miR171a

• Accession: MIMAT0005605
• Description: Brassica napus bna-miR171a mature miRNA
• Sequence: 74 - UUGAGCCGUGCCAAUAUCACG - 94
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17659282
   Cloning and characterization of microRNAs from Brassica napus
   "Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL"
   "FEBS Lett (2007) 581:3848-3856