miRBase entry: bna-MIR171d

Stem-loop bna-MIR171d


Accession
MI0006453
Description
Brassica napus bna-MIR171d precursor miRNA
Gene family
MIPF0000030; MIR171_1

Literature search
5 open access papers mention bna-MIR171d
(14 sentences)

Sequence

acaaugcgagauauuggugcgguucaaucagaaauccacacucuuuuguuguagagaucgguuuguuugaUUGAGCCGUGCCAAUAUCACGagugu
......((.(((((((((((((((((((((((...((...((((........))))...))....))))))))))))))))))))))).)).....

Structure
acaaug  a                       -aau  aca    uuu 
      cg gauauuggugcgguucaaucaga    cc   cucu   g
      || |||||||||||||||||||||||    ||   ||||    
      GC CUAUAACCGUGCCGAGUUaguuu    gg   gaga   u
-uguga  A                       guuu  cua    ugu 


Annotation confidence Not enough data
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Genome context
EM:BH741911: 143-238 [-]

Database links

Mature bna-miR171d

Accession MIMAT0005608
Description Brassica napus bna-miR171d mature miRNA
Sequence 71 - UUGAGCCGUGCCAAUAUCACG - 91
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17659282
    Cloning and characterization of microRNAs from Brassica napus
    "Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL"
    "FEBS Lett (2007) 581:3848-3856