Stem-loop bna-MIR169a

Accession

MI0006457

Description

Brassica napus bna-MIR169a precursor miRNA

Gene family

MIPF0000037; MIR169_2

Literature search

11 open access papers mention bna-MIR169a
(47 sentences)

Sequence

ugugaccaaaguagugugCAGCCAAGGAUGACUUGCCGAuuuaaaauaucugauaaguauuuuauuucguauuuuaaagaaaaaaaucaugaucggcaaguuguccuuggcuauacguuucuuugugucgcg
.((((((((((.((((((.((((((((((((((((((((((((((((((..(((((.....)))))..))))))))..............)))))))))))))))))))))).)))))).))))).))))).

Structure

u     -     u      C                      --------------        cu     g 
 gugac caaag agugug AGCCAAGGAUGACUUGCCGAuu              uaaaauau  gauaa u
 ||||| ||||| |||||| ||||||||||||||||||||||              ||||||||  ||||| a
 cgcug guuuc uugcau ucgguuccuguugaacggcuag              auuuuaug  uuauu u
g     u     u      a                      uacuaaaaaaagaa        cu     u 

Annotation confidence Not enough data

Genome context

EM:DU982154: 662-793 [+]

Mature bna-miR169a

• Accession: MIMAT0005612
• Description: Brassica napus bna-miR169a mature miRNA
• Sequence: 19 - CAGCCAAGGAUGACUUGCCGA - 39
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17659282
   Cloning and characterization of microRNAs from Brassica napus
   "Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL"
   "FEBS Lett (2007) 581:3848-3856