Stem-loop bna-MIR169i

Accession

MI0006465

Description

Brassica napus bna-MIR169i precursor miRNA

Gene family

MIPF0000012; MIR169_1

Literature search

11 open access papers mention bna-MIR169i
(42 sentences)

Sequence

agagucauguuuagUAGCCAAGGAUGACUUGCCUGCucuuuuucaccuccaugauucaauuuuauguacaguuuuggauuacuaugcuucuaaagaguauaguaauucaaaaucuuguugaaucuuugaggguaacaguuucaggcagucuccuuggcuaucuugacaugcuuu
.(((.((((((.((((((((((((.((((.(((((..........((((...((((((((..........(((((((((((((((((((.....)))))))))))))))))))...))))))))...))))..........))))))))))))))))))).)).))))))))).

Structure

a   u      u  -          U    U     Cucuuuuuca    cau        uuuauguaca                   c 
 gag cauguu ag UAGCCAAGGA GACU GCCUG          ccuc   gauucaau          guuuuggauuacuaugcuu u
 ||| |||||| || |||||||||| |||| |||||          ||||   ||||||||          ||||||||||||||||||| a
 uuc guacag uc aucgguuccu cuga cggac          ggag   cuaaguug          uaaaacuuaaugauaugag a
u   -      u  u          -    -     uuugacaaug    uuu        -------uuc                   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature bna-miR169i

• Accession: MIMAT0005620
• Description: Brassica napus bna-miR169i mature miRNA
• Sequence: 15 - UAGCCAAGGAUGACUUGCCUGC - 36
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17659282
   Cloning and characterization of microRNAs from Brassica napus
   "Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL"
   "FEBS Lett (2007) 581:3848-3856